• Mac OS executable package for Probalign beta 1.1 Java based graphical user interface version available here.
• Probalign beta 1.1 Java based graphical user interface version available here.
• Probalign beta 1.1 source code is available here.
• Probalign beta 1.0 source code is available here. This is a standalone C++ version and is much faster than the previous pipeline of Perl and C++ programs.
• The old Probalign code, implemented as a pipeline of C++ and Perl programs and slower than the current release, is available here.